Fit spOccupancy model

Usage

fitSpOccu(
  site_data_year,
  visit_data_year,
  config,
  sp_code,
  spatial = FALSE,
  sp_sites,
  ...
)

site_data_year: Occupancy site data for a single year and species (see ppl_create_site_visit)
visit_data_year: Occupancy visit data for a single year and species (see ppl_create_site_visit)
config: A list with pipeline configuration parameters (see configPipeline).
sp_code: SAFRING code of the species the pipeline is running for
spatial: Logical, indicating whether spatial random effects should be included in the model (TRUE) or not (FALSE, default)
sp_sites: Spatial object containing the pentads in site_data_year.
...: Other arguments that might be needed (e.g. for messages)

Either a spOccupancy model fit or the integer 3, indicating that model fit failed.