Run distribution indicators pipeline module 1 — ppl_run_pipe

Module 1 of the distribution indicators pipeline estimates occupancy probabilities in South Africa for a selected species. These occupancy probabilities form the basis for building more elaborated indicators in other pipeline modules.

Usage

ppl_run_pipe_dst1(
  sp_code,
  year,
  config,
  steps = c("data", "fit", "diagnose", "summary"),
  ...
)

Arguments

sp_code: SAFRING code of the species to run the pipeline for
year: Year to run to the pipeline for
config: A list with pipeline configuration parameters. See configPipeline
steps: A character vector containing the steps of the pipeline to run. Can contain: "data", "fit", "diagnose", "summary". Defaults to all of them.
...: Other arguments passed on to other functions