Diagnose convergence for JAGS state-space model

This function runs basic Rhat checks for a JAGS SSM

Usage

diagnoseRhatJagsSsm(fit, sp_code, config)

Arguments

fit

A JAGS state-space model fitted to CWAC data

sp_code

SAFRING reference number of the species we want to analyse.

config

A list with pipeline configuration parameters. See configPipeline

Value

A data frame with Rhat values for the different parameters estimated by the model.